Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015892427.1_cds_XP_016447239.1_42020
CDS Infomation

[gene=LOC107772257] [db_xref=GeneID:107772257] [protein=protein SPT2 homolog] [protein_id=XP_016447239.1] [location=join(135910..135930,136204..136421,136864..136981,137310..137387,137492..137615,137715..138187,138350..138627,139054..139140,139357..139468)] [gbkey=CDS]
Sequence

ATGCGGGGATATGAAGGAGATGAATATGATGAGTATTTGGATGAATACGAGGATGAAGGT
GAAGAGGAAGAGGCTGGTGAGGAGGAATATGAGGAGGAAGAGCCTCAACAGCCTTCACAG
GAGTTGTTAGAATACCTTGAGCTGAGGCAACGGTTAAAAGAAGATATCAGGAAGCAGAGA
AAGAAAGAACTAGGCGGTGGTTCTCGCGAAATTAAAAAGAATGCTTCATCCAGGGATAAT
TTTGGTTCCTTCTTTGGACCTTCACAGCCTGTTATCTCCCAAAGAGTAATCCAAGAAAGC
AAGTCGCTACTGGAGAATCCAAATCTGGCAGCGAAAGTCATGAAGTCTAGCCATCCTAGC
AATAAGAGCTCTGCTTCAAAACCTGCAGTCTCAAAAACTTCCACCAGCAACCATGCACCA
AAAGTCACAAATGGGTTAAAAAGAAAGATTGATATGGTAAAAAATACAAGGGACTATTCA
TTTCTATTATCTGATGATGCTGAACTTCCTGGTCCATCCAAAGGTCCTTTAACACAGAAA
GTCTCTGCCCCTAATTATGATGCACGGTTGGTTCAACGTCCAAGTGGCAAGCAGTCTTCA
AGTTATACTGGGAGAAAGCCTCTAGATGATCGTGAAGTGAAAAGAGGCAGCCAAATGCAT
CCTAAAGCTGCGATTCAGAAATCGGTGTCTATTAATAGACCGACTCAACCATCATTAGAC
TCTAGGAAACAGTTCAGTAGCAGTAATGGAAGTGGGCCTGGACGGCCTTTGGGGCCCAAA
GTTGTTCCCACCAAGGTTACAGGGAATCCAAATGATAAGAAATTTTTGGCACCAGGCGCC
AAAAGTAATGTGGTTGCTTTACATAGGCCAACCCCTTCGAAGATGCAACCTTCTGTACCA
AGGCAATCTTCGGTACAGAATAGGGTTCCTTTGGAATCTGGAAAGTCAAAAGTGATGCCT
AAACAAGGTGTGCCCGTCTCCAGACCTCAGGGAGTGATTCAGAAACAACCAGTCTCCTCG
TCTAGACCTCAGATAAAGCCACCACCTCCTAGAAATATAGCTCGGCCCTTGGAAGATAGG
CGCCCAGCGCTTCAGCAAAAAGAAGAGAGACGTCCAGCACTTCAGCAGAGAGATGACAGG
CGACCAGCACTTCAGCGACAAGAACAGAGGCGCCCAGCTCTTCAGCAAAGAGATGACAGG
CGTCCAGCACCTCTTCGAAAAGATGATAGGCGCCCAGCAAGAAAACCAATGAGACATGAT
GAAGAAGATGATGGAGCCGAAGCCATTAGTTTGATTAGGAAGATGTTTGGGTATAATCCT
AACAGGTATCGCGATGAAGATGATGATAGTGATATGGAGGCTAATTTTGATGAGATATTA
AAGGAAGAAAGGCGGAGTGCGAAAATAGCAAGGAAAGAAGATGAAGAAGAACTTCGGAAG
ATAGAAGAAGAAGAAAGGAGGGAGAGATTGAGAAAACAGGCAAAGAAGCGCAAGTTGAAC
CATCAATGA

Peptide Sequence

PEP ID

XP_016447239.1
PEP Infomation

PREDICTED: protein SPT2 homolog [Nicotiana tabacum]
Sequence

MRGYEGDEYDEYLDEYEDEGEEEEAGEEEYEEEEPQQPSQELLEYLELRQRLKEDIRKQR
KKELGGGSREIKKNASSRDNFGSFFGPSQPVISQRVIQESKSLLENPNLAAKVMKSSHPS
NKSSASKPAVSKTSTSNHAPKVTNGLKRKIDMVKNTRDYSFLLSDDAELPGPSKGPLTQK
VSAPNYDARLVQRPSGKQSSSYTGRKPLDDREVKRGSQMHPKAAIQKSVSINRPTQPSLD
SRKQFSSSNGSGPGRPLGPKVVPTKVTGNPNDKKFLAPGAKSNVVALHRPTPSKMQPSVP
RQSSVQNRVPLESGKSKVMPKQGVPVSRPQGVIQKQPVSSSRPQIKPPPPRNIARPLEDR
RPALQQKEERRPALQQRDDRRPALQRQEQRRPALQQRDDRRPAPLRKDDRRPARKPMRHD
EEDDGAEAISLIRKMFGYNPNRYRDEDDDSDMEANFDEILKEERRSAKIARKEDEEELRK
IEEEERRERLRKQAKKRKLNHQ

Transcript Sequence

Gene sequence data has not been registered.